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Through a single scoring matrix, evaluation of all the different possible configurations is done.

Through a single scoring matrix, evaluation of all the different possible configurations is done. Correct Answer False

To evaluate all the different possible configurations and to find the most energetically favorable, several types of scoring matrices are used. The complementary regions are evaluated by a dynamic programming algorithm to predict the most energetically stable molecule. The method is similar to the dynamic programming method used for sequence alignment.

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